However, we now emphasize that informationtheoretic approaches allow formal inference to be based on more than one model m timodel inference. Model selection and multimodel inference a practical. Traditional statistical inference can then be based we wrote this book to introduce graduate students and research workers in various scienti. The information theoretic approaches provide a unified and rigorous theory, an. Model selection based on information theory represents a quite different approach in the statistical sciences, and the resulting selected model may differ substantially from model selection based on some form of statistical null hypothesis testing. Model selection and multimodel inference a practical informationtheoretic approach authors. For a good book on model selection, see burnham and anderson 2002. Basic use of the informationtheoretic approach springerlink. Model selection, under the information theoretic approach presented here, attempts to identify the likely best model, orders the models from best to worst, and measures the plausibility calibration that each model is really the best as an inference. Model selection and multimodel inference springerlink.
Model selection, under the information theoretic approach presented here, attempts to identify the likely best model, orders the models from best to. Model selection is the task of selecting a statistical model from a set of candidate models, given data. Model selection, multimodel inference and informationtheoretic approaches in behav. Below, i illustrate how to use the metafor package in combination with the glmulti and mumin packages that provides the necessary functionality for model selection and multimodel inference using an information theoretic approach. A unique and comprehensive text on the philosophy of model based data analysis and strategy for the analysis of empirical data. The observed variability in biomass relationships within blacks mountain experimental forest suggests that users should consider how well the data used to develop a selected model relate to the conditions in any given application.
Traditional statistical inference can then be based on this selected best model. However, the task can also involve the design of experiments such that the data collected is wellsuited to the problem of model selec. This can be considered as a information theoretic analog of traditional multiple comparisons, except that the information contained in the entire model set is used instead of being restricted to a single model. This contribution is part of the special issue model selection, multimodel inference and informationtheoretic approaches in behavioural ecology see garamszegi 2010. Multimodel inference mmi monte carlo insights and extended examples statistical theory and numerical results summary. The second edition was prepared with three goals in mind. Relatively speaking, the concepts and practical use of the information theoretic approach are simpler than those of statistical hypothesis testing, and much simpler than some of the bayesian approaches to data analysis e. Anderson 2002, model selection and multimodel inference. An asymptotically unbiased estimator of expected kl information science philosophy and the informationtheoretic approach information theorists do not believe in the notion of true models. Model selection and multimodel inference a practical information. These methods can also be used in the metaanalytic context when model fitting is based on likelihood methods.
In particular, are there professors of statistics or other good students of statistics who explicitly recommended the book as a useful summary of knowledge on using aic for model selection. Model selection is the task of choosing a model from a set of potential models with the best inductive bias, which in practice means selecting parameters in an attempt to create a model of optimal complexity given finite training data. Bibliography includes bibliographical references p. A practical information theoretic approach kenneth p. The table ranks the models based on the selected information criteria and also provides delta aic and akaike weights. A unique and comprehensive text on the philosophy of modelbased data analysis and strategy for the analysis of empirical data. A practical information theoretic approach, second edition, kenneth p. Multi model inference mmi monte carlo insights and extended examples statistical theory and numerical results summary.
Here we discuss some fundamental concepts and techniques of model selection in the context of phylogenetics. However, we now emphasize that information theoretic approaches allow formal inference to be based on more than one model m timodel inference. Model selection is the task of choosing a model with the correct inductive bias, which in practice means selecting parameters in an attempt to create a model of optimal complexity for the given. Model selection methods are extended to allow inference from more than a single best model. Bolstered by a new chapter and an additional 140 pages, this very specialized book is now quite a sizable affair in its second edition. In the simplest cases, a preexisting set of data is considered. Symonds department of zoology, university of melbourne, melbourne, victoria 3010, australia email. Information theory studies the quantification, storage, and communication of information. Model selection using the glmulti and mumin packages the. David raymond anderson this book is unique in that it covers the philosophy of model based data analysis and a strategy for the analysis of empirical data. Truth, models, model sets, aic, and multimodel inference. A basis for model selection and inference basic use of the information theoretic approach formal inference from more than one model.
General challenges in the it approach translating biological hypotheses into statistical models this is likely to remain the most difficult aspect of using an it approach with model averaging in ecology and evolution, because of the complexity of biological processes. Feb 01, 2004 model selection, under the information theoretic approach presented here, attempts to identify the likely best model, orders the models from best to worst, and measures the plausibility calibration that each model is really the best as an inference. Practical use of the informationtheoretic approach. Subtitled a practical informationtheoretic approach, the book is built on the use of the kullbackleibler distance approach for multimodel inference. Model selection is a topic of special relevance in molecular phylogenetics that affects many, if not all, stages of phylogenetic inference. Aic, step or stepaic for stepwise model selection by aic. Information based model selection and multi model inference can be applied to describe uncertainty in a set of models to perform inference on the parameters of interest barker and link, 2015, burnham et al. Oct 31, 1998 these methods allow the databased selection of a best model and a ranking and weighting of the remaining models in a prede.
Indeed, we just learned march, 2002 that aic can be. A practical informationtheoretic approach, second edition, kenneth p. It was originally proposed by claude shannon in 1948 to find fundamental limits on signal processing and communication operations such as data compression, in a landmark paper titled a mathematical theory of communication. This is an informationtheoretic alternative to multiple comparisons e. A brief guide to model selection, multimodel inference and. Relatively speaking, the concepts and practical use of the informationtheoretic approach are simpler than those of statistical hypothesis testing, and much simpler than some of the bayesian approaches to data analysis e. The philosophical context of what is assumed about reality, approximating models, and the intent of model based inference should determine whether aic or bic is used. Such procedures lead to more robust inferences in many cases, and we advocate these approaches throughout the book. Various facets of such multimodel inference are presented here, particularly methods of model averaging.
513 925 32 272 525 1045 1074 443 287 1010 723 223 724 1119 1199 856 200 694 235 1447 1257 458 1050 931 689 254 719 621 1289 569 867 60 1242 186 275 630 243 309 743 1323 98 125 572 1130 1028 1069 292 159 1464 1048